BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B06SP1|AL425478
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1738 1586 0.0
>3x_Contig1738
Length = 21411
Score = 1586 bits (798), Expect = 0.0
Identities = 809/814 (99%)
Strand = Plus / Minus
Query: 1 attgtacaatagctctttcgttaaatccgtactgtgggacatgtttgttcaatgcgttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3560 attgtacaatagctctttcgttaaatccgtactgtgggacatgtttgttcaatgcgttcg 3501
Query: 61 ataacaccttgaattgcactgaatcggtgccataagtcaaaggtttgataatcttgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3500 ataacaccttgaattgcactgaatcggtgccataagtcaaaggtttgataatcttgggca 3441
Query: 121 aggcgtgttccaagttatttggatgataaagacgggtgaacactcgggacatgatacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 aggcgtgttccaagttatttggatgataaagacgggtgaacactcgggacatgatacagg 3381
Query: 181 gtgattagatggcgaggttgagtatgagatggtggtagtggtactttacaatgtggatac 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3380 gtgattagatggcgaggttgagtataagatggtggtagtggtactttacaatgtggatac 3321
Query: 241 cggtacttaaaaaaagagtgtgtcaaatggcattgggtgtgtcaaatgaatttttatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 cggtacttaaaaaaagagtgtgtcaaatggcattgggtgtgtcaaatgaatttttatcac 3261
Query: 301 aatggacacaggaagcacacatacaaaacacagacaagagcgtttctaagcttcgttgat 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3260 aatggacacaggaagcacacatacaaaacacagacaagagcgtttttaagcttcgttgat 3201
Query: 361 gattgtgaatgttcctgttatgtaggttgcatcacagcactattgagactgactgtcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3200 gattgtgaatgttcctgttatgtaggttgcatcacagcactattgagactgactgtcaag 3141
Query: 421 acactcatatatatatatmtbagtcacgtgcactcacgtgacttggatcgtgattccacc 480
|||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||
Sbjct: 3140 acactcatatatatatatatgagtcacgtgcactcacgtgactcggatcgtgattccacc 3081
Query: 481 taccatctctcttcgaatgtcccaatacggtaatctccgagttccacaagagtccggtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3080 taccatctctcttcgaatgtcccaatacggtaatctccgagttccacaagagtccggtaa 3021
Query: 541 aaggatgcatgcacaagacccgagatgagtcggatttcgagaggcatctcagatgccttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 aaggatgcatgcacaagacccgagatgagtcggatttcgagaggcatctcagatgccttt 2961
Query: 601 gccatcacagctccggaactataaaccacatccagtcatcgctctcagttggaattgtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2960 gccatcacagctccggaactataaaccacatccagtcatcgctctcagttggaattgtat 2901
Query: 661 tagtaatgcaattggaaagtttgacaagatgagctaacagaacgtgaaagaaaagaaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 tagtaatgcaattggaaagtttgacaagatgagctaacagaacgtgaaagaaaagaaatc 2841
Query: 721 cggccattttaaggtccgataatggagaacaattaagcaattgaaggtcattgacaagat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2840 cggccattttaaggtccgataatggagaacaattaagcaattgaaggtcattgacaagat 2781
Query: 781 tgttggagtatagaacatataatcataaatatgt 814
||||||||||||||||||||||||||||||||||
Sbjct: 2780 tgttggagtatagaacatataatcataaatatgt 2747
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7650
Number of Sequences: 1807
Number of extensions: 7650
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)